WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025682 Gene Name  Cbr-plpp-1.2
Sequence Name  ? CBG02670 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in phospholipid metabolic process. Is an ortholog of C. elegans plpp-1.2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02670b.1 CBG02670b.1   [unknown]
Transcript:CBG02670a.1 CBG02670a.1   [unknown]
Transcript:CBG02670c.1 CBG02670c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02670c CBG02670c   [unknown]
CDS:CBG02670b CBG02670b   [unknown]
CDS:CBG02670a CBG02670a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02670, AATGTTGCCACGAAGCATGTCGTTGGGAGACTCCGACCACATTTCCTTGATGTCTGTAAA, WBGene00025682   Expr1063312 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region