WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025698 Gene Name  Cbr-wrn-1
Sequence Name  ? CBG02689 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable 3'-5' DNA helicase activity; ATP binding activity; and nucleic acid binding activity. Predicted to be involved in DNA recombination; DNA repair; and DNA replication. Is an ortholog of C. elegans wrn-1. In C. elegans, wrn-1 is involved in DNA metabolic process; determination of adult lifespan; and response to ionizing radiation. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02689.1 CBG02689.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02689 CBG02689   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-wrn-1, AAGCACGCGGTATCAGTGAGGGTACTGTCTACAATTATCTAGTGATTGCTGTTGAAAAGG, WBGene00025698   Expr1063917 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

9 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  enables
  enables

0 Homologues

0 Locations

9 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region