WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025783 Gene Name  Cbr-max-2
Sequence Name  ? CBG02801 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans max-2. In C. elegans, max-2 is involved in several processes, including gonad morphogenesis; inductive cell migration; and signal transduction. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02801a.1 CBG02801a.1   [unknown]
Transcript:CBG02801b.1 CBG02801b.1   [unknown]
Transcript:CBG02801c.1 CBG02801c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02801c CBG02801c   [unknown]
CDS:CBG02801b CBG02801b   [unknown]
CDS:CBG02801a CBG02801a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-max-2, AAAAAGGCGAAGCCGCTTTCAAGTCTGGTTCCCTACATCAGAGCGGTCCGTGAAAAGTAG, WBGene00025784   Expr1067240 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG02801, GTGGATGTGCAGCTGACCGGACAAGTTACAGAACACCTCAGGAATTTGCAATGTACGAAT, WBGene00025783   Expr1053387 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region