WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025950 Gene Name  CBG03003
Sequence Name  ? CBG03003 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable nucleotide binding activity. Predicted to be involved in transcription initiation at RNA polymerase III promoter. Predicted to be part of RNA polymerase III complex. Is an ortholog of C. elegans M106.7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG03003a.1 CBG03003a.1   [unknown]
Transcript:CBG03003b.1 CBG03003b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG03003b CBG03003b   [unknown]
CDS:CBG03003a CBG03003a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG03003, AAGAGGAACTCGAGAAGCTTATCACAACAATCACTGACTGTCTGCCACCTCCACCAAAAC, WBGene00025950   Expr1067463 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  part_of
  part_of

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  part_of
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region