WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00026194 Gene Name  Cbr-klp-3
Sequence Name  ? CBG03312 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Is an ortholog of C. elegans klp-3. In C. elegans, klp-3 is involved in chromosome separation. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG03312a.1 CBG03312a.1   [unknown]
Transcript:CBG03312c.1 CBG03312c.1   [unknown]
Transcript:CBG03312b.1 CBG03312b.1   [unknown]
Transcript:CBG03312d.1 CBG03312d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG03312d CBG03312d   [unknown]
CDS:CBG03312c CBG03312c   [unknown]
CDS:CBG03312b CBG03312b   [unknown]
CDS:CBG03312a CBG03312a   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00108259
WBVar00108258
WBVar00108260

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-klp-3, TTGGTGGATCTTGCTGGATCCGAAAGAGTATCACAAACAAATGCAACCGGACAATTGCTC, WBGene00026194   Expr1063853 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region