WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00026585 Gene Name  CBG03802
Sequence Name  ? CBG03802 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of RNA polymerase III complex. Is an ortholog of C. elegans F26E4.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG03802b.1 CBG03802b.1   [unknown]
Transcript:CBG03802a.1 CBG03802a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG03802b CBG03802b   [unknown]
CDS:CBG03802a CBG03802a   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00017659

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG03803, ACAAGTGATCCATCGCGATTTGGCAGCAAGGAATGTCCTGTTGGATAAATCAGACAATTG, WBGene00026586   Expr1058758 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG03802, TCACTCTACCATTTAGGAAATGTGAAACACAATTTGGTTGGATCAATGGCATGGGGAGGA, WBGene00026585   Expr1069087 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region