WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00026685 Gene Name  Cbr-unc-94
Sequence Name  ? CBG03923 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable tropomyosin binding activity. Predicted to be involved in pointed-end actin filament capping. Is an ortholog of C. elegans unc-94. In C. elegans, unc-94 is involved in several processes, including myofibril assembly; nematode larval development; and pointed-end actin filament capping. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG03923a.2 CBG03923a.2   [unknown]
Transcript:CBG03923a.1 CBG03923a.1   [unknown]
Transcript:CBG03923b.1 CBG03923b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG03923a CBG03923a   [unknown]
CDS:CBG03923b CBG03923b   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00136092
WBVar00136093
WBVar00136094
WBVar00136095
WBVar00136096

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-94, CAAATTGCTTCGATCTACTCTAGTGACACAGTCGATTGTGGAATTCAAGGCAGACAACCA, WBGene00026685   Expr1059218 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region