WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027051 Gene Name  CBG04359
Sequence Name  ? CBG04359 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase-mediated signal transduction. Is an ortholog of C. elegans F22G12.5. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04359b.1 CBG04359b.1   [unknown]
Transcript:CBG04359a.1 CBG04359a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04359b CBG04359b   [unknown]
CDS:CBG04359a CBG04359a   [unknown]

0 RNAi Result

69 Allele

Public Name
WBVar00109201
WBVar00109202
WBVar00109203
WBVar00109204
WBVar00109205
WBVar00109206
WBVar00109207
WBVar00109208
WBVar00109200
WBVar00109212
WBVar00109213
WBVar00109214
WBVar00109215
WBVar00109216
WBVar00109217
WBVar00109218
WBVar00109219
WBVar00109210
WBVar00109211
WBVar00109209
WBVar00109223
WBVar00109224
WBVar00109225
WBVar00109220
WBVar00109221
WBVar00109222
WBVar00109198
WBVar00109199
WBVar00002257
WBVar00002262

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG04359, CAATTGGCCATCGAAGCGAATGCGTCAGCGATCGGTTCTGATCAACAGACGTATCATGAA, WBGene00027051   Expr1053960 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region