WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027063 Gene Name  CBG04377
Sequence Name  ? CBG04377 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Is an ortholog of C. elegans phm-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04377.1 CBG04377.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04377 CBG04377   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00109247
WBVar00109248
WBVar00109249
WBVar00109256
WBVar00109257
WBVar00109258
WBVar00109259
WBVar00109250
WBVar00109251
WBVar00109252
WBVar00109253
WBVar00109254
WBVar00109255
WBVar00109260
WBVar00002427

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG04377, GAACAGGAGCCGGCTAGAAGACGTCAACATGACGAGCAGGATCGGAAGGCACAGGTGAGC, WBGene00027063   Expr1056494 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region