WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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Gene :

WormBase Gene ID  ? WBGene00028049 Gene Name  Cbr-dpy-21
Sequence Name  ? CBG05643 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be located in nucleus. Is an ortholog of C. elegans dpy-21. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05643.1 CBG05643.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05643 CBG05643   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00110818
WBVar00110819
WBVar00110816
WBVar00110817
WBVar00110821
WBVar00110822
WBVar00110820

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dpy-21, GAACACAATGCGCCGCTCTGGCATCAGATATGCGAAATTCGAGCTTCGCGAAAACGATCT, WBGene00028049   Expr1060069 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region