WormMine: Gene WBGene00028442

• WormBase Gene ID: WBGene00028442
• Gene Name: Cbr-lys-4
• Sequence Name: CBG06112
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to enable lysozyme activity. Predicted to be involved in cell wall macromolecule catabolic process and peptidoglycan catabolic process. Is an ortholog of C. elegans lys-4. In C. elegans, lys-4 is involved in defense response to Gram-positive bacterium.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG06112.1	CBG06112.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG06112	CBG06112		[unknown]

0 RNAi Result

2 Allele

• WBVar00111259
• WBVar00111260

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Virus infection: Santeuil infected at L3 larva stage for 12 hours.	Transcripts that showed signicantly decreased expression after Santeuil virus infection to C. briggsae strain JU1264.	edgeR, FDR < 0.05.	WBPaper00051137:Santeuil-virus_downregulated_JU1264

0 Expression Patterns

3 GO Annotation

0 Homologues

0 Locations

3 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region