WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028707 Gene Name  Cbr-lec-12
Sequence Name  ? CBG06431 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable carbohydrate binding activity. Is an ortholog of C. elegans lec-12. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

8 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06431h.1 CBG06431h.1   [unknown]
Transcript:CBG06431g.1 CBG06431g.1   [unknown]
Transcript:CBG06431d.1 CBG06431d.1   [unknown]
Transcript:CBG06431c.1 CBG06431c.1   [unknown]
Transcript:CBG06431f.1 CBG06431f.1   [unknown]
Transcript:CBG06431e.1 CBG06431e.1   [unknown]
Transcript:CBG06431b.1 CBG06431b.1   [unknown]
Transcript:CBG06431a.1 CBG06431a.1   [unknown]
 

Other

8 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06431b CBG06431b   [unknown]
CDS:CBG06431c CBG06431c   [unknown]
CDS:CBG06431a CBG06431a   [unknown]
CDS:CBG06431h CBG06431h   [unknown]
CDS:CBG06431f CBG06431f   [unknown]
CDS:CBG06431g CBG06431g   [unknown]
CDS:CBG06431d CBG06431d   [unknown]
CDS:CBG06431e CBG06431e   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG06431, AACGGAAGAACGAACATTTGCCACGTTTCCATTCAGCAAAGGAATCACTCATGACGTCGT, WBGene00028707   Expr1053106 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region