WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029076 Gene Name  Cbr-unc-32
Sequence Name  ? CBG06881 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; positive regulation of neurotransmitter secretion; and response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06881d.1 CBG06881d.1   [unknown]
Transcript:CBG06881c.1 CBG06881c.1   [unknown]
Transcript:CBG06881b.1 CBG06881b.1   [unknown]
Transcript:CBG06881a.1 CBG06881a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06881a CBG06881a   [unknown]
CDS:CBG06881b CBG06881b   [unknown]
CDS:CBG06881c CBG06881c   [unknown]
CDS:CBG06881d CBG06881d   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00007029

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-32, CTTATGGAAGGTCTCTCAGCGTTCCTTCACGCTCTTCGTCTTCATTGGCAAGCAAAAAAA, WBGene00029076   Expr1053530 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  part_of

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region