WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029606 Gene Name  CBG07620
Sequence Name  ? CBG07620 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable glycosyltransferase activity. Predicted to be involved in protein glycosylation. Is an ortholog of C. elegans T10B10.8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07620.1 CBG07620.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07620 CBG07620   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00112631
WBVar00112630
WBVar00112626
WBVar00112625
WBVar00112624
WBVar00112623
WBVar00112629
WBVar00112628
WBVar00112627

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07620, TACATGTTTTCCGTTTGGTTGGCACTGAAACTAGCACATCAATCAGCACAACCGATAGCT, WBGene00029606   Expr1054952 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region