WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029791 Gene Name  Cbr-alkb-7
Sequence Name  ? CBG07885 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in DNA damage response. Is an ortholog of C. elegans alkb-7. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07885.1 CBG07885.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07885 CBG07885   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00033249
WBVar00005549
WBVar00005554
WBVar00005534
WBVar00005539
WBVar00005544
WBVar00005529
WBVar00112839
WBVar00112842
WBVar00112841
WBVar00112840
WBVar00112846
WBVar00112845
WBVar00112844
WBVar00112843
WBVar00112849
WBVar00112848
WBVar00112847

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07885, CATAAGGACCAGAAGGACGAGCTGGTGGTGGACCTGCTGATGCCAAGAAGGAGTTTGTAT, WBGene00029791   Expr1067662 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region