WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029799 Gene Name  Cbr-tiar-2
Sequence Name  ? CBG07904 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Is an ortholog of C. elegans tiar-2. In C. elegans, tiar-2 is involved in determination of adult lifespan; nematode larval development; and response to stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07904.1 CBG07904.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07904 CBG07904   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00033269
WBVar00033274
WBVar00033279
WBVar00033284
WBVar00033289
WBVar00033254
WBVar00033259
WBVar00033264
WBVar00112868
WBVar00112867
WBVar00112869

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07904, CCGCAGCTAATGCAGCAATGGAACAATTATTGGCAGGGAGGCAAGCAGGGACCACCACCA, WBGene00029799   Expr1064642 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region