WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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Gene :

WormBase Gene ID  ? WBGene00029902 Gene Name  Cbr-aex-6
Sequence Name  ? CBG08034 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans aex-6. In C. elegans, aex-6 is involved in exocytosis; positive regulation of defecation; and positive regulation of protein catabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08034.1 CBG08034.1   [unknown]
Transcript:CBG08034.2 CBG08034.2   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08034 CBG08034   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-aex-6, ACGTTGAGAAATCAGTGGATTGTCTTCTGGATTTGGTGATGCAAAGAATTCAACAATCCG, WBGene00029902   Expr1062854 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region