WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030715 Gene Name  Cbr-dnc-2
Sequence Name  ? CBG09048 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in microtubule-based process. Predicted to be part of dynactin complex. Is an ortholog of C. elegans dnc-2. In C. elegans, dnc-2 is involved in chromosome segregation; establishment of mitotic spindle orientation; and single fertilization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09048.1 CBG09048.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09048 CBG09048   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00114359
WBVar00114363
WBVar00114362
WBVar00114361
WBVar00114360

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dnc-2, ACCTCGACAAGAAGGTTAACGAAATTCTCGAATTGATGCAGAAATGGGACGTCGCTTGTT, WBGene00030715   Expr1066939 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  part_of
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region