WormMine: Gene WBGene00030747

• WormBase Gene ID: WBGene00030747
• Gene Name: Cbr-polq-1
• Sequence Name: CBG09083
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to enable ATP binding activity; DNA binding activity; and DNA-directed DNA polymerase activity. Predicted to be involved in DNA-templated DNA replication. Is an ortholog of C. elegans polq-1. In C. elegans, polq-1 is involved in base-excision repair, gap-filling and cellular response to ionizing radiation.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG09083.1	CBG09083.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG09083	CBG09083		[unknown]

0 RNAi Result

31 Allele

• WBVar00137021
• WBVar00137023
• WBVar00137022
• WBVar00137025
• WBVar00137024
• WBVar00137026
• WBVar00114392
• WBVar00114391
• WBVar00114390
• WBVar00114395
• WBVar00114394
• WBVar00114393
• WBVar00114379
• WBVar00114381
• WBVar00114380
• WBVar00114385
• WBVar00114384
• WBVar00114383
• WBVar00114382
• WBVar00114389
• WBVar00114388
• WBVar00114387
• WBVar00114386
• WBVar00114374
• WBVar00114373
• WBVar00114372
• WBVar00114378
• WBVar00114377
• WBVar00114376
• WBVar00114375

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_upregulated

3 Expression Patterns

• Primary Identifier: Expr1060449
• Remark: CBG09084, GATTCTTCTCAGCTCTGGCGTTGTTTGATTTGATCAATGAAATGAGTATATATCAGGTGA, WBGene00030748
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1064395
• Remark: Cbr-polq-1, CATTCATTGTCGCATGGAAATGTGCACAGCTACTGGAAGAATGTTGACCAGTAGCCCTAA, WBGene00030747
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1064551
• Remark: CBG09086, ATCATGCTGGATTGACGATGGAAGAGAGAGAATGCATTGAAATGGGATTTCGAGAGAAGA, WBGene00030750
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

6 GO Annotation

0 Homologues

0 Locations

6 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region