WormMine: Gene WBGene00030865

• WormBase Gene ID: WBGene00030865
• Gene Name: Cbr-ttn-1
• Sequence Name: CBG09247
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to enable ATP binding activity; calcium ion binding activity; and protein kinase activity. Predicted to be involved in negative regulation of protein sumoylation. Is an ortholog of C. elegans ttn-1.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG09247b.1	CBG09247b.1		[unknown]
Transcript:CBG09247c.1	CBG09247c.1		[unknown]
Transcript:CBG09247d.1	CBG09247d.1		[unknown]
Transcript:CBG09247a.1	CBG09247a.1		[unknown]

Other

4 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG09247c	CBG09247c		[unknown]
CDS:CBG09247b	CBG09247b		[unknown]
CDS:CBG09247a	CBG09247a		[unknown]
CDS:CBG09247d	CBG09247d		[unknown]

0 RNAi Result

41 Allele

• WBVar00046462
• WBVar00046457
• WBVar00046472
• WBVar00046467
• WBVar00046482
• WBVar00046477
• WBVar00046442
• WBVar00046452
• WBVar00046447
• WBVar00114712
• WBVar00114711
• WBVar00114710
• WBVar00114716
• WBVar00114715
• WBVar00114714
• WBVar00114713
• WBVar00114717
• WBVar00114701
• WBVar00114700
• WBVar00114705
• WBVar00114704
• WBVar00114703
• WBVar00114702
• WBVar00114709
• WBVar00114708
• WBVar00114707
• WBVar00114706
• WBVar00114686
• WBVar00114699
• WBVar00114698

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

0 Expression Clusters

6 Expression Patterns

• Primary Identifier: Expr1070165
• Remark: CBG18884, CTACACTAATCGAAGATGAAGGAGAATACTGCTGTACTGCAAGCAACGTAGCCGGAACTG, WBGene00038196
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1059853
• Remark: Cbr-ttn-1, CAATGATTCTATCCGAAGGTAAGATTACTGTATGTTCTCTAGGAATATCTGTGTATCGTC, WBGene00030865
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1061494
• Remark: CBG09238, TCAGCGAAGATTTGAGCGTTGATTCAAGCGCAGATTTCACAGTGGTGCAGGACAAAGCTG, WBGene00030862
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1063394
• Remark: CBG27130, GTCGACCACAACCAGAAGTGATCTGGATCGATAACAATGGAAAGGTTATTGAGGAATCCA, WBGene00088544
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1050250
• Remark: CBG09244, AAAAAGACAGTGGATTGAGAATGTATCTGGAGTTAGTTCGTTGACGATTGGAGAGATGAG, WBGene00030863
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1066392
• Remark: CBG18883, GAATCACAATCGATGGCTCAGTTTCTACGTTACAGCTTAGAACCGAAGTGATTGGAACTC, WBGene00038195
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

5 GO Annotation

0 Homologues

0 Locations

5 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region