WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031063 Gene Name  Cbr-eif-3.K
Sequence Name  ? CBG09495 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ribosome binding activity and translation initiation factor activity. Predicted to be involved in regulation of translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of C. elegans eif-3.K. In C. elegans, eif-3.K is involved in positive regulation of apoptotic process. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09495.1 CBG09495.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09495 CBG09495   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-eif-3.K, TTACTGCTCTAGCAAAGAAGTTCGGCTGGGAGACCAAAGAAAACGGAGAGGTCTTCTTTG, WBGene00031063   Expr1050775 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  located_in
  part_of
  enables
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  located_in
  part_of
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region