WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031766 Gene Name  Cbr-nhr-181
Sequence Name  ? CBG10365 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-181. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10365.1 CBG10365.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10365 CBG10365   [unknown]

0 RNAi Result

28 Allele

Public Name
WBVar00037989
WBVar00037984
WBVar00037994
WBVar00037999
WBVar00037959
WBVar00037954
WBVar00037969
WBVar00037964
WBVar00037979
WBVar00037974
WBVar00115730
WBVar00115731
WBVar00115743
WBVar00115744
WBVar00115745
WBVar00115736
WBVar00115737
WBVar00115738
WBVar00115739
WBVar00115732
WBVar00115733
WBVar00115734
WBVar00115735
WBVar00115740
WBVar00115741
WBVar00115742
WBVar00010029
WBVar00010024

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-nhr-181, GTCAAAGCAATCTACAATCATACACGCGTCTCGGACATCTTCCATCTGATGACGTTCGAT, WBGene00031766   Expr1062593 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region