WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032065 Gene Name  Cbr-chd-1
Sequence Name  ? CBG10790 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Is an ortholog of C. elegans chd-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10790.1 CBG10790.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10790 CBG10790   [unknown]

0 RNAi Result

33 Allele

Public Name
WBVar00116182
WBVar00116183
WBVar00116184
WBVar00116185
WBVar00116180
WBVar00116181
WBVar00116186
WBVar00116187
WBVar00116188
WBVar00116189
WBVar00116171
WBVar00116172
WBVar00116173
WBVar00116174
WBVar00116170
WBVar00116179
WBVar00116175
WBVar00116176
WBVar00116177
WBVar00116178
WBVar00116190
WBVar00116160
WBVar00116161
WBVar00116162
WBVar00116163
WBVar00116168
WBVar00116169
WBVar00116164
WBVar00116165
WBVar00116166

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10790, CTAAAGAGAAGAACCATCGACCAGAGAAAAGAAAAGACCATAGAGAAGGAACGAGCAGGG, WBGene00032065   Expr1066872 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region