WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032820 Gene Name  Cbr-polh-1
Sequence Name  ? CBG11743 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable damaged DNA binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans polh-1. In C. elegans, polh-1 is involved in embryo development; error-prone translesion synthesis; and negative regulation of mitotic DNA damage checkpoint. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11743.1 CBG11743.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11743 CBG11743   [unknown]

0 RNAi Result

20 Allele

Public Name
WBVar00117548
WBVar00117547
WBVar00117549
WBVar00117555
WBVar00117554
WBVar00117557
WBVar00117556
WBVar00117551
WBVar00117550
WBVar00117553
WBVar00117552
WBVar00117539
WBVar00117544
WBVar00117543
WBVar00117546
WBVar00117545
WBVar00117540
WBVar00117542
WBVar00117541
WBVar00117558

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-polh-1, GATTGGTGAAAGAGCTGGCGAAACGATTGGGGACGGATCAGGCTGAAAACAAGAGAACTG, WBGene00032820   Expr1066756 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region