WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033215 Gene Name  CBG12234
Sequence Name  ? CBG12234 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable mRNA 5'-cap (guanine-N7-)-methyltransferase activity. Predicted to be involved in 7-methylguanosine mRNA capping. Is an ortholog of C. elegans tag-72. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12234b.1 CBG12234b.1   [unknown]
Transcript:CBG12234a.1 CBG12234a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12234a CBG12234a   [unknown]
CDS:CBG12234b CBG12234b   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00118383
WBVar00118385
WBVar00118384
WBVar00118387
WBVar00118386
WBVar00118389
WBVar00118388

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-tag-72, AATTTGTCGGAACACTTTCCAAGTCAGAATGGGAAGCGATTTGCATGTATCTGGTTTTTG, WBGene00033215   Expr1051381 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region