WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033307 Gene Name  Cbr-tlf-1
Sequence Name  ? CBG12345 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Predicted to be involved in DNA-templated transcription initiation. Is an ortholog of C. elegans tlf-1. In C. elegans, tlf-1 is involved in embryo development; positive regulation of protein phosphorylation; and regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12345a.1 CBG12345a.1   [unknown]
Transcript:CBG12345b.1 CBG12345b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12345a CBG12345a   [unknown]
CDS:CBG12345b CBG12345b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00014537
WBVar00014532

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-tlf-1, AAGAAGTTGCTGCAAAGTATCCAGCAGAATCGACGTACGAGCCAGAATTGTCGGTCGGAC, WBGene00033307   Expr1051370 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region