WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033677 Gene Name  CBG12785
Sequence Name  ? CBG12785 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans B0511.12. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12785c.1 CBG12785c.1   [unknown]
Transcript:CBG12785d.1 CBG12785d.1   [unknown]
Transcript:CBG12785a.1 CBG12785a.1   [unknown]
Transcript:CBG12785b.1 CBG12785b.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12785a CBG12785a   [unknown]
CDS:CBG12785b CBG12785b   [unknown]
CDS:CBG12785c CBG12785c   [unknown]
CDS:CBG12785d CBG12785d   [unknown]

0 RNAi Result

21 Allele

Public Name
WBVar00118959
WBVar00118956
WBVar00118955
WBVar00118958
WBVar00118957
WBVar00118963
WBVar00118962
WBVar00118965
WBVar00118964
WBVar00118961
WBVar00118960
WBVar00118949
WBVar00118948
WBVar00118947
WBVar00118952
WBVar00118951
WBVar00118954
WBVar00118953
WBVar00118950
WBVar00118967
WBVar00118966

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG12782, AATGGCTGGAAAAATCGTTTACACATGGTACCCATCACATCCACTCCGGAATCGAAGAAG, WBGene00033674   Expr1061745 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG12785, TTCAGAATCTCATGAATCTGCACCAATAATTGAACTGGCTTCATCATCCCAACCGAGCAC, WBGene00033677   Expr1064393 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region