WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034375 Gene Name  CBG13636
Sequence Name  ? CBG13636 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable endonuclease activity. Predicted to be involved in rRNA processing. Predicted to be part of Las1 complex. Is an ortholog of C. elegans Y6B3B.9. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13636a.1 CBG13636a.1   [unknown]
Transcript:CBG13636b.1 CBG13636b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13636b CBG13636b   [unknown]
CDS:CBG13636a CBG13636a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG13636, GAGACCTTCACCGTAGTCGTCGACGAATCATCCGACAATAGCCGAAAGAGAAAAGCCTTC, WBGene00034375   Expr1066088 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region