WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034435 Gene Name  Cbr-acr-24
Sequence Name  ? CBG13714 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acr-24. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13714.1 CBG13714.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13714 CBG13714   [unknown]

0 RNAi Result

21 Allele

Public Name
WBVar00137876
WBVar00137875
WBVar00137878
WBVar00137877
WBVar00137879
WBVar00137881
WBVar00137880
WBVar00137883
WBVar00137882
WBVar00137885
WBVar00137884
WBVar00137887
WBVar00137886
WBVar00137867
WBVar00137869
WBVar00137868
WBVar00137870
WBVar00137872
WBVar00137871
WBVar00137874
WBVar00137873

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-acr-24, CCATGTCCATTCTAATGATGATGGTTTCCGAACAAATGCCAACATCATCAGATTTCGTTC, WBGene00034435   Expr1055839 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region