WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034639 Gene Name  Cbr-rbm-39
Sequence Name  ? CBG13969 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans rbm-39. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13969.1 CBG13969.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13969 CBG13969   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00120650
WBVar00120651
WBVar00120652
WBVar00120653
WBVar00120647
WBVar00120648
WBVar00120649

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG13969, ATCTAATATTTCAGCGAACATGCGCCGAAAGAAACCGCATTGCCAACTCGTCAGTCGCCT, WBGene00034639   Expr1065522 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region