WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034730 Gene Name  Cbr-sec-3
Sequence Name  ? CBG14132 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in exocytosis. Predicted to be part of exocyst. Is an ortholog of C. elegans sec-3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14132.1 CBG14132.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14132 CBG14132   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00002039
WBVar00002029
WBVar00002034
WBVar00002014
WBVar00002019
WBVar00002024
WBVar00002004
WBVar00002009
WBVar00120993
WBVar00029144

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sec-3, CAGTTCATCAAGCAGATTGCCGAGTACAACAAGTTGATTCTAACCTGCTATCCGGGAATC, WBGene00034730   Expr1069276 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  part_of

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region