WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035473 Gene Name  Cbr-dss-1
Sequence Name  ? CBG15145 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in mRNA export from nucleus and proteasome assembly. Predicted to be part of proteasome regulatory particle, lid subcomplex. Is an ortholog of C. elegans dss-1. In C. elegans, dss-1 is involved in several processes, including intestinal absorption; positive regulation of protein ubiquitination; and vulval development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15145.1 CBG15145.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15145 CBG15145   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dss-1, AGACCCACGAGAGCGAATTCTCGAAGCAGCTAAAGGAGGAACTTCGCAAAGGAGGACATC, WBGene00035473   Expr1063127 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region