WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035891 Gene Name  Cbr-arx-5
Sequence Name  ? CBG15746 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in Arp2/3 complex-mediated actin nucleation and regulation of actin filament polymerization. Predicted to be located in cytoskeleton. Predicted to be part of Arp2/3 protein complex. Is an ortholog of C. elegans arx-5. In C. elegans, arx-5 is involved in epithelial cell migration and morphogenesis of embryonic epithelium. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15746.1 CBG15746.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15746 CBG15746   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-arx-5, CCAATCCCCGGGGAAAATGGATTTCCACTGAACTCAATGTACAAATCGCCACAATCCAAG, WBGene00035891   Expr1064424 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  part_of

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region