WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036382 Gene Name  CBG16448
Sequence Name  ? CBG16448 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable copper ion binding activity and oxidoreductase activity. Is an ortholog of C. elegans F21D5.3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16448.1 CBG16448.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16448 CBG16448   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00009579
WBVar00123949
WBVar00123960
WBVar00123950
WBVar00123952
WBVar00123951
WBVar00123954
WBVar00123953
WBVar00123956
WBVar00123955
WBVar00123958
WBVar00123957
WBVar00123959

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG16448, AAGGATTGTGGAACATTTAAAGTTGACAAATTGCCCGAGCTGCGTCTTCCAACAACCGGC, WBGene00036382   Expr1061471 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region