WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036525 Gene Name  Cbr-mig-10
Sequence Name  ? CBG16642 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in signal transduction. Is an ortholog of C. elegans mig-10. In C. elegans, mig-10 is involved in several processes, including cell migration; cell projection organization; and egg-laying behavior. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16642a.1 CBG16642a.1   [unknown]
Transcript:CBG16642b.1 CBG16642b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16642a CBG16642a   [unknown]
CDS:CBG16642b CBG16642b   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00138392
WBVar00138391
WBVar00138394
WBVar00138393

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG16645, GTTGTGAAGAAGAATGCGATCTGGAAGTGGACAGCGACGAAGAAGAGCAACTTTTGGGAG, WBGene00036527   Expr1056029 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-mig-10, AACGATTTGGAAGCTGCGCTGGCGAGACGAAGAGAGAAAATGGCTACGATGGAGCAATAG, WBGene00036525   Expr1065706 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region