WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036615 Gene Name  Cbr-kvs-1
Sequence Name  ? CBG16762 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport; protein homooligomerization; and transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Is an ortholog of C. elegans kvs-1. In C. elegans, kvs-1 is involved in several processes, including forward locomotion; hyperosmotic response; and mechanosensory behavior. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

7 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16762g.1 CBG16762g.1   [unknown]
Transcript:CBG16762a.1 CBG16762a.1   [unknown]
Transcript:CBG16762c.1 CBG16762c.1   [unknown]
Transcript:CBG16762d.1 CBG16762d.1   [unknown]
Transcript:CBG16762b.1 CBG16762b.1   [unknown]
Transcript:CBG16762f.1 CBG16762f.1   [unknown]
Transcript:CBG16762e.1 CBG16762e.1   [unknown]
 

Other

7 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16762f CBG16762f   [unknown]
CDS:CBG16762g CBG16762g   [unknown]
CDS:CBG16762b CBG16762b   [unknown]
CDS:CBG16762c CBG16762c   [unknown]
CDS:CBG16762d CBG16762d   [unknown]
CDS:CBG16762e CBG16762e   [unknown]
CDS:CBG16762a CBG16762a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-kvs-1, AAAGCTAATTGCAAGCGGTGCCATCATTAGTGGAGTCTTGGTATTGGCTCTTCCTATCAC, WBGene00036615   Expr1056486 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

8 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  located_in
  part_of
  enables

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  located_in
  part_of
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region