WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036818 Gene Name  Cbr-gba-2
Sequence Name  ? CBG17050 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable glucosylceramidase activity. Predicted to be involved in sphingolipid metabolic process. Is an ortholog of C. elegans gba-2. Biotype  SO:0001217
Genetic Position  :±
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SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17050.3 CBG17050.3   [unknown]
Transcript:CBG17050.1 CBG17050.1   [unknown]
Transcript:CBG17050.2 CBG17050.2   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17050 CBG17050   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00043587
WBVar00021932
WBVar00021937
WBVar00021942
WBVar00021962
WBVar00021947
WBVar00021967
WBVar00021952
WBVar00021957

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17050, ACGGTCATCAGATCATTATCAAGTTCATATGGGTCCAAGATCGATTGTAACTTTGTATAT, WBGene00036818   Expr1058137 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region