WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036856 Gene Name  Cbr-dkf-2
Sequence Name  ? CBG17105 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Is an ortholog of C. elegans dkf-2. In C. elegans, dkf-2 is involved in defense response to bacterium; determination of adult lifespan; and signal transduction. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17105d.1 CBG17105d.1   [unknown]
Transcript:CBG17105c.1 CBG17105c.1   [unknown]
Transcript:CBG17105b.1 CBG17105b.1   [unknown]
Transcript:CBG17105a.1 CBG17105a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17105d CBG17105d   [unknown]
CDS:CBG17105c CBG17105c   [unknown]
CDS:CBG17105b CBG17105b   [unknown]
CDS:CBG17105a CBG17105a   [unknown]

0 RNAi Result

72 Allele

Public Name
WBVar00138433
WBVar00138432
WBVar00138435
WBVar00138434
WBVar00138436
WBVar00041049
WBVar00041044
WBVar00041054
WBVar00047287
WBVar00047292
WBVar00012704
WBVar00012609
WBVar00012604
WBVar00012699
WBVar00012649
WBVar00012644
WBVar00012639
WBVar00012634
WBVar00012629
WBVar00012624
WBVar00012619
WBVar00012614
WBVar00012689
WBVar00012684
WBVar00012694
WBVar00012679
WBVar00012674
WBVar00012669
WBVar00012664
WBVar00012659

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dkf-2, CACTCACGAATCGGATGATTCCAGATGGCATGCCTATGAAAAAGAACACAACGTCACACC, WBGene00036856   Expr1059568 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region