WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036904 Gene Name  Cbr-zipt-13
Sequence Name  ? CBG17194 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metal ion transmembrane transporter activity. Predicted to be involved in metal ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans zipt-13. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17194.1 CBG17194.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17194 CBG17194   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00124714
WBVar00124715
WBVar00124713
WBVar00124718
WBVar00124719
WBVar00124716
WBVar00124717
WBVar00124720

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17194, CTTACCACTATCACCATTCTCCTCCACGAGATTCCACACGAAATCAGTGATTTCGCTATC, WBGene00036904   Expr1050406 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region