WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037041 Gene Name  CBG17404
Sequence Name  ? CBG17404 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable serine-type endopeptidase inhibitor activity. Is an ortholog of C. elegans C34F6.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17404a.1 CBG17404a.1   [unknown]
Transcript:CBG17404b.1 CBG17404b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17404b CBG17404b   [unknown]
CDS:CBG17404a CBG17404a   [unknown]

0 RNAi Result

33 Allele

Public Name
WBVar00041444
WBVar00041404
WBVar00041409
WBVar00041414
WBVar00041419
WBVar00041424
WBVar00041429
WBVar00041439
WBVar00041434
WBVar00041369
WBVar00041364
WBVar00041374
WBVar00041379
WBVar00041384
WBVar00041389
WBVar00041394
WBVar00041399
WBVar00041359
WBVar00041354
WBVar00012929
WBVar00012924
WBVar00012919
WBVar00012964
WBVar00012959
WBVar00012954
WBVar00012949
WBVar00012944
WBVar00012939
WBVar00012934
WBVar00125315

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17404, GGATGTGAAGGAACACTGAATAACTTCCACTCGCTCCAAAGATGTACAGAGATTTGCTGC, WBGene00037041   Expr1055524 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region