WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037042 Gene Name  CBG17405
Sequence Name  ? CBG17405 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable endopeptidase inhibitor activity. Predicted to be located in extracellular space. Is an ortholog of C. elegans F13D2.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17405b.1 CBG17405b.1   [unknown]
Transcript:CBG17405a.1 CBG17405a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17405b CBG17405b   [unknown]
CDS:CBG17405a CBG17405a   [unknown]

0 RNAi Result

31 Allele

Public Name
WBVar00041449
WBVar00041459
WBVar00041454
WBVar00041469
WBVar00041464
WBVar00012999
WBVar00012994
WBVar00012989
WBVar00012984
WBVar00012979
WBVar00012974
WBVar00013059
WBVar00013064
WBVar00013049
WBVar00013054
WBVar00013039
WBVar00013044
WBVar00013029
WBVar00013034
WBVar00013069
WBVar00013079
WBVar00013074
WBVar00013019
WBVar00013014
WBVar00013024
WBVar00013009
WBVar00013004
WBVar00125322
WBVar00125320
WBVar00125321

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17405, ATGGTGAAGGTACAGCCATTGGAGCTTGGAACAAAGCGGATGGATGATATATTGATTTTC, WBGene00037042   Expr1068759 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG17408, ACCAATCCAACTATCAAAACATTAGACATATTCCACGGAACCTACACGTTGTTCACTGCG, WBGene00037045   Expr1054475 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region