WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037204 Gene Name  Cbr-inpp-1
Sequence Name  ? CBG17633 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Is an ortholog of C. elegans inpp-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17633b.1 CBG17633b.1   [unknown]
Transcript:CBG17633a.1 CBG17633a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17633b CBG17633b   [unknown]
CDS:CBG17633a CBG17633a   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00031889
WBVar00031884
WBVar00031899
WBVar00031894
WBVar00031879
WBVar00004424
WBVar00004429
WBVar00004414
WBVar00004419
WBVar00125648

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17633, ATATCTCGAACCGATCAAATACGACTGTATGCGAGGAACAACGCCTTCTGATCACAAAGC, WBGene00037204   Expr1050623 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region