WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037316 Gene Name  Cbr-nep-11
Sequence Name  ? CBG17774 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans nep-11. Biotype  SO:0001217
Genetic Position  :±
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Quick Links:
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17774b.1 CBG17774b.1   [unknown]
Transcript:CBG17774a.1 CBG17774a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17774a CBG17774a   [unknown]
CDS:CBG17774b CBG17774b   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00051404
WBVar00051409
WBVar00051399
WBVar00051394
WBVar00125777
WBVar00125778
WBVar00020219
WBVar00020214

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17774, GTTCTTTCCAACATGGAAGCCTTCGCAGACGTCTACAAATGCCCCAAAAACTCTCCAGTT, WBGene00037316   Expr1069694 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region