WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037579 Gene Name  Cbr-cdk-12
Sequence Name  ? CBG18089 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans cdk-12. In C. elegans, cdk-12 is involved in nematode larval development. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18089.1 CBG18089.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18089 CBG18089   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00024482
WBVar00024487

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG25971, GCCGTCATCGTTCACCAAAACGAGGTGGCTCTTCGAAGAAGAGGAGTAAGAGGAATTCAT, WBGene00087385   Expr1066527 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-cdtl-7, CTTTTACATCCTTGGATTCGGAATCTGGAGCATGCTTGTGTTCAGCCGTTAAAACTGCCA, WBGene00037579   Expr1060704 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG25972, AAAACGAGGTGGATCAAGACAAGGAAACAGAGGGAGAGATCGGGAATCGAGGGATTCTTT, WBGene00087386   Expr1061152 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region