WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037867 Gene Name  Cbr-rhgf-2
Sequence Name  ? CBG18446 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans rhgf-2. In C. elegans, rhgf-2 is involved in several processes, including Rho protein signal transduction; embryonic body morphogenesis; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18446.1 CBG18446.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18446 CBG18446   [unknown]

0 RNAi Result

70 Allele

Public Name
WBVar00138769
WBVar00138771
WBVar00138772
WBVar00138770
WBVar00138775
WBVar00138776
WBVar00138773
WBVar00138774
WBVar00138779
WBVar00138777
WBVar00138778
WBVar00138782
WBVar00138783
WBVar00138780
WBVar00138781
WBVar00138784
WBVar00044307
WBVar00044302
WBVar00044362
WBVar00044372
WBVar00044367
WBVar00044382
WBVar00044377
WBVar00044387
WBVar00044317
WBVar00044312
WBVar00044332
WBVar00044337
WBVar00044352
WBVar00044342

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG26163, GAGCATCACTTGATGAATGGAAGAAACGGTGCTATGGTTGATGTGAGTTTTTTTGGAGAA, WBGene00087577   Expr1050821 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-rhgf-2, GCAACAGAGTCAACACATGCCGGTTATACATCGGAAAGCGAGTAGTATGGACTCGCAGGC, WBGene00037867   Expr1066119 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region