WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037993 Gene Name  CBG18606
Sequence Name  ? CBG18606 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable acid phosphatase activity and metal ion binding activity. Is an ortholog of C. elegans F21A3.11 and F21A3.2. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18606.2 CBG18606.2   [unknown]
Transcript:CBG18606.1 CBG18606.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18606 CBG18606   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00138844
WBVar00126608
WBVar00126609
WBVar00025392
WBVar00025397

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG18607, CGGCGATTCTATATCCAATTCTTACTGTATTCCTGCTCTGTCAACTTTCGGCATATAAAA, WBGene00037994   Expr1064528 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG18606, ACGGAATTCTATTTCTGGACACAATGGGGTTTTCATCAGATAAAACATCAGTTTGACTGG, WBGene00037993   Expr1054051 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG18591, AGGTCTACCATTAACACATGGATATGGTCTAGAGAAGCTATTCTATGAATATGGAGTGGA, WBGene00037980   Expr1052780 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region