WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038092 Gene Name  Cbr-sra-9
Sequence Name  ? CBG18722 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable G protein-coupled receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is an ortholog of C. elegans sra-9. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18722.1 CBG18722.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18722 CBG18722   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00126682
WBVar00126683
WBVar00126680
WBVar00126681
WBVar00126686
WBVar00126687
WBVar00126684
WBVar00126685
WBVar00126679
WBVar00126677
WBVar00126678

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sra-9, GCTGATCTACCGTATCCGATGTAGCCACGCGAGTCGAGTTCAAAATTTAATTGGAATTTC, WBGene00038092   Expr1060455 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region