WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038561 Gene Name  Cbr-dop-2
Sequence Name  ? CBG19317 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans dop-2. In C. elegans, dop-2 is involved in several processes, including cellular response to organonitrogen compound; male mating behavior; and regulation of locomotion involved in locomotory behavior. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19317c.1 CBG19317c.1   [unknown]
Transcript:CBG19317a.1 CBG19317a.1   [unknown]
Transcript:CBG19317b.1 CBG19317b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19317b CBG19317b   [unknown]
CDS:CBG19317a CBG19317a   [unknown]
CDS:CBG19317c CBG19317c   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00026482
WBVar00026487

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dop-2, AAATCCGTTTGAATGTCGCTTCTATAACGCCGAATTCTCAATTCTGAGTTCTTTCATTTC, WBGene00038561   Expr1052223 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region