WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039277 Gene Name  Cbr-haf-9
Sequence Name  ? CBG20243 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ABC-type peptide transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in peptide transport and transmembrane transport. Predicted to be located in lysosomal membrane. Is an ortholog of C. elegans haf-9. In C. elegans, haf-9 is involved in lysosomal transport and regulatory ncRNA-mediated post-transcriptional gene silencing. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20243.1 CBG20243.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20243 CBG20243   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00128372
WBVar00128371

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

9 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in
  located_in

0 Homologues

0 Locations

9 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region