WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039723 Gene Name  Cbr-ctl-1
Sequence Name  ? CBG20805 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable catalase activity and heme binding activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans ctl-1. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20805.1 CBG20805.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20805 CBG20805   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00129019
WBVar00129020
WBVar00129021
WBVar00129022
WBVar00129027
WBVar00129028
WBVar00129023
WBVar00129024
WBVar00129025
WBVar00129026

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ctl-3, GAAGGTGTTGAAAGAAGACGAGAGAGATCGTTTGGTTGAGAATTTCGCAGATTCTTTGTC, WBGene00039723   Expr1052055 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region